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Sophia Sue's Projects

boom icon boom

bíogo wrapper for libbam - use biogo/hts/bam

cnvkit icon cnvkit

Copy number variant detection from targeted DNA sequencing

gatk icon gatk

Official code repository for GATK versions 4 and up

lumpy-sv icon lumpy-sv

lumpy: a general probabilistic framework for structural variant discovery

manta icon manta

Structural variant and indel caller for mapped sequencing data

suynblog icon suynblog

like Andrew-liu's blog, just lean Django's basic blog making.

uploadfiles icon uploadfiles

like simpleisbetterthancomplex.com, just lean Django's basic uploadFiles, especially multiple files uploading by useing the plug-in.(jquery-file-upload)

vios icon vios

rapid Virus Identification On Site

vioser icon vioser

VIOS repository's docker deployment version. Refer to the result on DockerHub.

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