Comments (3)
tbepler
commented on July 26, 2024
That should not be the case. Which version of topaz do you have install? If you installed from source, can you tell me which commit?
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bHimes
commented on July 26, 2024
The version is 0.1.0, commit 70f5f04
Interestingly, after setting up a new conda environment just for topaz to solve the pytorch version problem in issue #9 and without installing matplotlib, I did not run into the same problem.
I tried uninstalling matplotlib in my base, but the problem was not reproducible.
Sorry for the confusion!
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tbepler
commented on July 26, 2024
Great, glad to hear that resolved everything.
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Related Issues (20)
- Issue: particles picked by Topaz are not displayed in Relion GUI HOT 4
- particles format HOT 1
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- ERROR: no training particles specified. HOT 2
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- Topaz DeNoise3D and array size HOT 10
- training topaz demonising model with frames collected in .eer format
- Can denoising be applied in a particle-wise situation? HOT 1
- Importing particle star file to cryosparc
- Git checkout errors HOT 2
- Topaz filament picking HOT 7
- topaz denoise crashes with RuntimeError: CUDA out of memory HOT 4
- denoise training using tif format movie file HOT 5
- How to Reproduce the Full Pretraining
- ImportError: (...)/libmkldnn.so.0: undefined symbol: cblas_sgemm_alloc HOT 1
- CudaWarning: Found no NVIDIA driver on your system. Please check that you have an NVIDIA GPU and installed a driver from http://www.nvidia.com/Download/index.aspx HOT 3
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