Comments (14)
This proposal needs more evidence for demand (see the Vocabulary Maintenance Specification - Section 3.1). Anybody who is interested in the adoption/change of this term, should comment with their use case below. If demand is not demonstrated by the next annual review of open proposals (late 2020), this proposal will be dismissed.
from dwc.
Ping @mdoering
from dwc.
important term to represent parsed names. In use by GBIF and CoL for years already:
http://api.col.plus/parser/name?name=Abies%20(Abies)%20alba
http://api.gbif.org/v1/parser/name?name=Abies%20(Abies)%20alba
from dwc.
Catalogue of Life uses this in the ColDP format to exchange data.
It is used in IPNI, and present in the TDWG ontology and TCS.
Exchanging parsed infrageneric names is not possible currently in DwC. It has only support for bi- or trinomials.
Examples from IPNI:
Vicia sect. Cracca Dumort.
dwc:genericName = Vicia
dwc:infragenericEpithet = Cracca
dwc:scientificNameAuthorship= Dumort.
dwc:taxonRank= section
ICZN subgenus example Abacetus (Abacetillus) ambiguus Straneo, 1969
:
dwc:genericName = Abacetus
dwc:infragenericEpithet = Abacetillus
dwc:specificEpithet = ambiguus
dwc:scientificNameAuthorship= Straneo, 1969
dwc:taxonRank= species
from dwc.
For the specificEpithet we currently have:
The name of the first or species epithet of the scientificName.
Proposal for infragenericEpithet:
Definition: The infrageneric part of the scientificName.
Comment: dwc:infragenericEpithet should be used in conjunction with dwc:genericName, dwc:specificEpithet, dwc:infraspecificEpithet, dwc:taxonRank and dwc:scientificNameAuthorship to represent the individual elements of the complete scientificName. It can be used to indicate the subgenus placement of a species which in zoology is often given in brackets, e.g. Abacetus (Abacetillus) ambiguus. But it can also be used to share infrageneric names such as botanical sections e.g. Vicia sect. Cracca
from dwc.
@mdoering Would you say that this proposal should come with a recommendation to deprecate dwc:subgenus?
from dwc.
No, it is the same as with dwc:genus and dwc:genericName that dwc:subgenus is the subgenus the name is classified in, but that might be different for synonyms.
from dwc.
This term is in TCS.
from dwc.
dwc:infragenericEpithet
falls into the category of "convenience terms" and should therefore be added to table 3.5 in the RDF Guide. It should not have a dwciri:
analog.
from dwc.
Could someone please confirm if there is a mapping to ABCD?
from dwc.
There are a few:
- //DataSets/DataSet/Units/Unit/Identifications/Identification/Result/TaxonIdentified/ScientificName/NameAtomised/Bacterial/Subgenus (bacterial names)
- //DataSets/DataSet/Units/Unit/Identifications/Identification/Result/TaxonIdentified/ScientificName/NameAtomised/Zoological/Subgenus (zoological names)
For botanical names, for some reason, it has been merged with specificEpithet into 'FirstEpithet':
- //DataSets/DataSet/Units/Unit/Identifications/Identification/Result/TaxonIdentified/ScientificName/NameAtomised/Botanical/FirstEpithet
So I would suggest that there is no equivalent in ABCD 2.06 that works with all types of names (that may have infrageneric epithets), but it might be helpful to the people who can deliver infrageneric epithets in ABCD 2 to list the XPath for Subgenus in zoological names.
from dwc.
+1 to what Niels commented... in ABCD, the atomised parts are different for botanical, zoological, bacterial and viral names.
from dwc.
Thanks @nielsklazenga and @jholetschek. Incorporated into the first comment.
from dwc.
Done.
from dwc.
Related Issues (20)
- Change term - latestPeriodOrHighestSystem
- Change term - lowestBiostratigraphicZone
- Change term - member
- Explain "dwc:" in preamble to Quick Reference Guide HOT 1
- Make Release 2023-06-28 HOT 4
- Change term - superfamily HOT 1
- Write script to produce Darwin Core extensions for GBIF HOT 2
- Term provenance broken? HOT 3
- Improve term indices to be more complete? HOT 4
- Change examples for term - occurrenceID HOT 23
- Change term - identifiedBy HOT 11
- Change term - identificationReferences
- Section 1.4.3 of the RDF Guide should be updated to include other "iri" namespaces.
- rowType no longer resolves in Darwin Core Text Guide HOT 2
- Date on QRG needs to be updated to 2023-09-13 HOT 1
- Fix examples for most classes HOT 11
- Minor: Typo in a comment HOT 2
- Explain how to programatically access a term description HOT 2
- multiple vernacular names for a taxon? HOT 2
- New Term - substrate HOT 1
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