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Thomas Gilgenast's Projects

alpine icon alpine

Modeling and correcting fragment sequence bias for RNA-seq

aotd-graph icon aotd-graph

a graph visualization for "album of the day" selections

botkit icon botkit

Botkit is a toolkit for making bot applications

c1gamesstarterkit icon c1gamesstarterkit

Starter kit for new players of Terminal. Contains starter-algo and a basic CLI for running/debugging algo's locally.

caching-s3-proxy icon caching-s3-proxy

Caching HTTP proxy for AWS S3, using local filesystem with LRU eviction policy.

django-tictactoe icon django-tictactoe

A realtime tic tac toe game using socketio, gevent, and redis. Also includes an unbeatable AI.

hic3defdr icon hic3defdr

a genome-scale differential loop finder for Hi-C data

iced icon iced

Normalizing Hi-C contact counts efficiently

jax-md icon jax-md

Differentiable, Hardware Accelerated, Molecular Dynamics

luigi icon luigi

Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.

m2r icon m2r

Markdown to reStructuredText converter

netzoopy icon netzoopy

netZooPy is a network biology package implemented in Python.

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