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3d-medical-imaging-preprocessing-all-you-need

This Repo Will contain the Preprocessing Code for 3D Medical Imaging

abdomenct-1k

The official repository of "AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem?"

absegnet

[RedJournal2023]Comprehensive evaluation of a deep learning model for automatic organs at risk segmentation on heterogeneous computed tomography images for abdominal radiotherapy.

adversarial_autoencoder_tina

Adversarial_Autoencoders手写数字识别， pytorch版本

ai-for-medicine-specialization-deeplearning.ai

My assignment soultions to the AI for Medicine Specialization course from coursera

connected-components-3d

Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants.

dcm2niix

dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

intensity-normalization

normalize the intensities of various MR image modalities

labelme

Image Polygonal Annotation with Python (polygon, rectangle, circle, line, point and image-level flag annotation).

nnformer

nnunet

pytorch-ssim

pytorch structural similarity (SSIM) loss

pytorch-summary

Model summary in PyTorch similar to `model.summary()` in Keras

stargan-v2

StarGAN v2 - Official PyTorch Implementation (CVPR 2020)

torchstat

Model analyzer in PyTorch

tutorials

MONAI Tutorials

word

[MedIA2022]WORD: A large scale dataset, benchmark and clinical applicable study for abdominal organ segmentation from CT image