tobiasrausch Goto Github PK
Name: Tobias Rausch
Type: User
Company: EMBL
Bio: Researcher in Computational Genomics
Location: Germany
Blog: https://tobiasrausch.com
Name: Tobias Rausch
Type: User
Company: EMBL
Bio: Researcher in Computational Genomics
Location: Germany
Blog: https://tobiasrausch.com
BAM Statistics, Feature Counting and Annotation
Allele-specific expression
Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)
This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
Conda recipes for the bioconda channel.
Scripts to generate circos plots
Coral: COpy-numbeR ALterations
SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing
dbg stuff
exercise 1
Indexing Tests
LAMP testing (Covid screening)
A long-read analysis toolbox for cancer and population genomics
Machine Learning
nRex: Germline and somatic single-nucleotide, short indel and structural variant calling
Phase a BAM file using a phased SNP scaffold
Kubernetes (K8s) stuff
Templated insertion discovery
Reference-free FASTQ filter for rare germline and somatic variants
Repli-Seq analysis pipeline
RNA-Seq processing pipeline
Structural variant calling tutorial using long-reads.
Human Genetic Structural Variants
Scripts
Tools for 10X
Homepage of Tobias Rausch
A tutorial on structural variant calling for short read sequencing data
VCFaid: Genotype likelihood based GQ estimation
Wally: Visualization of aligned sequencing reads and contigs
Workflows
A declarative, efficient, and flexible JavaScript library for building user interfaces.
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Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
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Some thing interesting about visualization, use data art
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Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.