torhou Goto Github PK

alignment_vis

androhid

Automatically exported from code.google.com/p/androhid

aoc2018

solutions for Advent of Code 2018

bioconda-recipes

Conda recipes for the bioconda channel.

blockbuster_fixes

blockbuster_rewrite

rewrite of blockbuster in python

column_sort

sorts columns by the header description

continuous-integration-circle

docker-ipython-notebook

IPython running in a docker container. This image can be used to integrate IPython into Galaxy

download_store

universal storage

galaxyconfiggenerator

Given a CTD file, GalaxyConfigGenerator generates a Galaxy wrapper

galaxytools

Galaxy Tool wrappers

generatenanoporereads

given perfect sequences in FASTA format, this script generates messier reads with fixed error rates

gscripts

General Use Scripts and Helper functions

hash-cgmlst

helper-scripts

jbardeen

For calculation of STM images from VASP output

jupyter-notebooks

Collection of more or less illustrative notebooks

kmer_analyses

mentalist

The MLST pipeline developed by the PathOGiST research group

merge_pcr_duplicates

Tool for iCLIP data analysis. Merges PCR duplicates according to random barcodes that were extracted earlier.

minimap2

A versatile pairwise aligner for genomic and spliced nucleotide sequences

mission_course_material

A bioinformatics course on MLST and variant calling

openmstogalaxy

Create wrappers for Galaxy from the cli description of the TOPP tools

posters

This poster details the infrastructure, services and methods the RBC will employ to provide comprehensive bioinformatics services and how Galaxy is used to provide an integrated workbench for RNA analysis.

rnashapeswrapper

Galaxy wrapper xml file for RNAshapes

star

RNA-seq aligner

tools-iuc

Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission

training-material

A collection of training material from offered Galaxy courses