Related Issues (20)
- Lots of acetaminophens still not conflated with the main acetaminophen
- Glimepiride has a long chemical name despite the alternate label algorithm
- Replace the in-memory glomming code with DuckDB databases
- Golgi apparatus split
- Store alternate type information in addition to Biolink types
- Incorporate LOINC into Babel
- Why is `NCBITaxon:family` in Babel?
- Some concepts are being assigned to the wrong category
- Get synonyms-per-clique distribution
- Do a better job of cliquing inadequatelly mapped UMLS identifiers HOT 1
- Carbon has a preferred label of "activated charcoal"
- Should NCIT be an allowed prefix for proteins?
- Label chosen as per preferred label prefixes for chemicals doesn't always return the best name
- PUBCHEM.COMPOUND:162343947 causing problems in drugchemical conflation in the current run
- Some UMLS-MeSH connections are broken in Babel 2024jul13
- Add manual concords for other types
- Some entities are showing up in both proteins and chemicals HOT 1
- Chembl identifiers aren't being properly connected to other entities
- Some genes have bad preferred names, but preferred prefix boosting might help HOT 1
- Downscore labels which are very long or look like chemical names
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