Comments (1)
Hi Lee,
The downloaded file should be formatted like this
'>1b2m_A mol:protein length:104 RIBONUCLEASE T1
ACDYTCGSNCYSSSDVSTAQAAGYQLHEDGETVGSNSYPHKYNNYEGFDFSVSSPYYEWPILSSGDVYSGGSPGADRVVFNENNQLAGVITHTGASGNNFVECT
1b2m_B mol:protein length:104 RIBONUCLEASE T1
ACDYTCGSNCYSSSDVSTAQAAGYQLHEDGETVGSNSYPHKYNNYEGFDFSVSSPYYEWPILSSGDVYSGGSPGADRVVFNENNQLAGVITHTGASGNNFVECT
...'
The codes above aim to extract the chain ID (e.g. 'A' and 'B' and save them as 'a' and 'b'). I don't know the detailed reason , maybe the file format of PDB website changes or the version of my codes is Python 2.7? Maybe you can adjust your codes according to your custom file format.
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