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Mostly playing with knowledge graphs (RDF, SPARQL, ontologies, SHACL, RML), life sciences data, and web technologies.

👨‍💻 Recent projects

💠 Shapes of you: an index for publicly available semantic resources (ontologies, vocabularies, shapes, queries, mappings) stored in Git repositories (GitHub, GitLab, Gitee). Visit index.semanticscience.org

♻️ FAIR Enough: a service to define and run evaluations of the FAIR principles (Findable, Accessible, Interoperable, Reusable) on online resources. Visit fair-enough.semanticscience.org

🔬 Nanopublications and the Knowledge Collaboratory: An ecosystem to publish and retrieve scientific claims using Translator standards. Visit api.collaboratory.semanticscience.org

🔭 The Data Science Research Infrastructure: An OKD Kubernetes cluster to run Data Science experiments at Maastricht University. Visit dsri.maastrichtuniversity.nl

🧭 into-the-graph: A lightweight web browser for SPARQL endpoints. Visit maastrichtu-ids.github.io/into-the-graph

🔮 Translator OpenPredict: a Translator OpenAPI to compute and serve predictions of biomedical concepts associations. Visit openpredict.semanticscience.org

🧞 Contributions to Open Source

Build README

Vincent Emonet's Projects

angular-connect-app icon angular-connect-app

Complete angular app with Docker multi stage build to connect to OpenAPI providers like Google or ORCID and using Bootstrap

aphasia-website icon aphasia-website

Angular website using Material Design and Bootstrap for aphasia.help. Source project on GitLab.

argo icon argo

Argo Workflows: Get stuff done with Kubernetes.

bio2rdf-scripts icon bio2rdf-scripts

⚕️📝 Scripts that Bio2RDF users have created to generate RDF versions of scientific datasets

biolink-model icon biolink-model

Schema and generated objects for biolink data model and upper ontology

bioregistry icon bioregistry

📮 An integrative registry of biological databases, ontologies, and nomenclatures.

biratime icon biratime

⌨️ A simple Oh My ZSH! theme based on the Bira theme, displaying time instead of the username

cellprofiler icon cellprofiler

Mirror of the official CellProfiler Docker image on GitHub Container Registry (to avoid DockerHub pull rates limitations)

ckg icon ckg

Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported from diverse biomedical databases 2) automate knowledge discovery making use of all the information contained in the graph

concept-resolver icon concept-resolver

🔎 A name resolution service for biomedical concepts, using vector databases and similarity search

connexion icon connexion

Swagger/OpenAPI First framework for Python on top of Flask with automatic endpoint validation & OAuth2 support

controversciences icon controversciences

ControverSciences est un portail collaboratif et indépendant qui rassemble les publications scientifiques autour de questions controversées, en les rendant accessible à tous.

cookiecutter icon cookiecutter

A cross-platform command-line utility that creates projects from cookiecutters (project templates), e.g. Python package projects, C projects.

covid19-knowledge-graph icon covid19-knowledge-graph

Builds a knowledge graph from the [COVID-19 Open Research Dataset (CORD-19)](https://pages.semanticscholar.org/coronavirus-research) dataset.

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