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allensdk

applications-evaluation

Code to anonymise, randomize, assign applications to evaluate

bg-presentation

Slides for the presentation of BrainGlobe at NeuroMatch 3.0

brainglobe

Package defining the core Atlas class of brainglobe

brainrender

a python based software for visualization of neuroanatomical and morphological data.

categigi2020

Sito matrimonio

cccn

ClopathCorrelatedClusteredNetworks

cellfinder

Automated 3D cell detection and registration of whole-brain images

cochlea_simulation

A PDE model describing the mechanics of the cochlea implemented in MATLAB.

colab-test

Testing colab integration

conda

Specifying a conda environment with `environment.yml`

eco_beauty

example-python

Python coverage example

fastpli

Fiber Architecture Simulation Toolbox for 3D Polarized Light Imaging

final_assignment_python_cimec

final_python_assignment

Code written in Python based on other past projects

final_python_project_sartin

This project for the CIMeC PhD Python course contains behavioural data analysis and plots.

imlib

General data processing functions

jpca

jPCA for Neural Data Analysis in Python

julia_statistics

Bunch of notebooks to learn Julia following the "Doing Bayesian Data Analysis" book

lotr

Fork before publication linting

meye

A deep-learning-based web tool for translational and real-time pupillometry

napari

napari: a fast, interactive, multi-dimensional image viewer for python

naparimovie

Create movies from series of key-frames in napari.

neuro

Visualisation and analysis of brain imaging data

neuroconv

Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.

news-ocr

Downloading local newspapers and OCR them for data mining

ocplot

Advanced plot editing for publishable figures

oj-pancakes

Open Journal of Theoretical Pancake Studies

osgridconverter

A collection of libraries to convert between Latitude / Longitude and map grid references, particularly the Ordinance Survey National Grid