Vinh Tong's Projects
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
Official code for "DPM-Solver: A Fast ODE Solver for Diffusion Probabilistic Model Sampling in Around 10 Steps" (Neurips 2022 Oral)
Official code for "DPM-Solver-v3: Improved Diffusion ODE Solver with Empirical Model Statistics" (NeurIPS 2023)
This is an implementation of the paper Entity Alignment for Knowledge Graphs with Multi-order Convolutional Networks
EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
This is the code of the paper: Adaptive Network Alignment with Multi-order Convolutional Networks
Implementation of GeoDiff: a Geometric Diffusion Model for Molecular Conformation Generation (ICLR 2022).
Geometric Latent Diffusion Models for 3D Molecule Generation
Graph Neural Networks for Knowledge Graph Link Prediction (WSDM 2022) (Pytorch)
Protein Graph Library
Joint Multilingual Knowledge Graph Completion and Alignment (Findings of EMNLP 2022) (Pytorch)
Insightful Tutorials and Papers about Knowledge Graphs
Lecture notes on PCA, AEs, VAEs, denoising and diffusion models
The Code of "Are Negative Samples Necessary in Entity Alignment? AnApproach with High Performance, Scalability and Robustness" CIKM 2021
My clone repository
SwinGNN: diffusion model for graph generation
Open source code for TankBind. Galixir Tenchnologies
Implementation of Torsional Diffusion for Molecular Conformer Generation (NeurIPS 2022)
Config files for my GitHub profile.