vllorens Goto Github PK
Name: Veronica Llorens Rico
Type: User
Bio: Postdoctoral researcher at the VIB-KU Leuven Center for Microbiology, studying the functionality of the gut microbiota.
Location: Leuven, Belgium
Name: Veronica Llorens Rico
Type: User
Bio: Postdoctoral researcher at the VIB-KU Leuven Center for Microbiology, studying the functionality of the gut microbiota.
Location: Leuven, Belgium
Base docker file to use in other projects
Code to reproduce the analyses from the paper "Benchmarking microbiome transformations favors experimental quantitative approaches to address compositionality and sampling depth biases"
Code accompanying the manuscript "Clinical practices underlie COVID-19 patient respiratory microbiome composition and its interactions with the host"
Hands-on #1 from the Microbiome Data Analysis Workshop (https://mdawo.meetinghand.com/)
Hands-on #2 from the Microbiome Data Analysis Workshop (https://mdawo.meetinghand.com/)
Simulate metatranscriptomics datasets
Bioconductor package "polyester", devel version. RNA-seq read simulator.
Quantitative Microbiome Profiling
Code to reproduce the RNA-seq analysis from the paper "Mechanistic modeling identifies emergent behavior in a synthetic human gut community"
Personal website of Veronica Llorens Rico
Tutorial on modeling metabolic pathways with ODEs, from the EMBO Whole Cell Modeling summer school
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