vortexing Goto Github PK
Name: Amy Paguirigan
Type: User
Company: Fred Hutchinson Cancer Center
Bio: Part-time Deputy Chief Data Officer, Part-time Translational Genomics Researcher, Full-time Data Science Enabler
Location: Seattle, WA
Name: Amy Paguirigan
Type: User
Company: Fred Hutchinson Cancer Center
Bio: Part-time Deputy Chief Data Officer, Part-time Translational Genomics Researcher, Full-time Data Science Enabler
Location: Seattle, WA
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
gatk and updated samtools
10x genomics subset bam docker setup/wdl
umi-tools, STAR aligner, samtools
10x genomics vartrix docker/wdl setup
Howto and implementation documentation
Official code repository for GATK versions 4 and up
Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.
search s3 based on tags
examples of using slurm in life sciences workflows using posix file systems and object storage
Docker container with STAR and samtools
strelka in docker
A short landing page for me.
Workflow Description Language - Specification and Implementations
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.