Missing BackboneData ? about holoprot

[vsomnath]

Hi,

Thanks for reaching out! -- I think some classes used to be named differently before, and the data was processed with that. Let me have a look at this and correct the dataclasses if necessary and reupload.

Thanks,
Vignesh

[Vincentx15]

Ok thanks a ton ! And will this procedure give me the meshes and graphs + features as expected or should I proceed differently ?

[vsomnath]

Yes, I think if you specified prot_mode as surface2backbone this should construct the full hierarchical graph.

[Vincentx15]

Hello, do you have any updates ? I think it is just a matter of releasing another version of your private repository where you had a BackboneData class, is it not ? Or maybe updating the data ?

Please let me know if you think it will eventually work, otherwise I will start the process of trying to create the data from scratch on my end !

Best,
Vincent

[lmqfly]

I have the same problem, AttributeError: Can't get attribute 'BackboneData' on <module 'holoprot.data.base'