Name: Waldron Lab at the CUNY SPH
Type: Organization
Bio: Software and educational materials from the Waldron lab for computational biostatistics at the CUNY SPH in New York City
Twitter: LeviWaldron1
Location: New York, NY, USA
Blog: https://waldronlab.io/
Waldron Lab at the CUNY SPH's Projects
AnVIL/Terra workshop for Bioconductor conference
Applied Statistics for High-Throughput Biology
A curated list of bioinformatics bench-marking papers and resources.
An R client for bedbase.org
Challenges for the Biocoductor community.
Materials presented at the BiocNYC meet-up
Docker container built on bioconductor/bioconductor_docker
Docker container built on bioconductor/release_core2
Biostatistics 621 / 821
teaching materials for short course
Harmonized annotation of microbial physiology
Analyses with data and signatures imported from the bugphyzz package.
A microbial signatures database
For documenting issues related to BugSigDB curation.
BugSigDB data files
Figures and Tables for the BugSigDB paper
R-side access to published microbial signatures from BugSigDB
BugSigDB Stats and Analysis
Simple exploratory analysis of curated microbe signatures
Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
WaldronLab Cheat Sheets
Functionality for CNV analysis
Workshop for CNV analysis with Bioconductor
Conconi et al. Estimate of Anaerobic Threshold from TCX File
A repository for common configuration scripts
Curated Metagenomic Data of the Human Microbiome