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bccmodels

Source files for DREAM7 BCC models

bioitworld2017

Notebooks and data for BioIT World 2017 Workshop

caf

Attractor finding algorithm -- Java version. I recommend using the R version (cafr), which is more recent. This is just for a wrap-up of my works.

cafr

Attractor finding algorithm

dreambox7

DreamBox7 package was used to create metagenes, pre-process data for the DREAM7 breast cancer prognosis challenge.

genotypewalker

Cpp project to walk through genotype files and identify probes which are significantly associated with EC10

har-tutorial

A simple tutorial for Human Activity Recognition

leetcode

Coding practice on LeetCode

markdown-here

Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.

py-webrtcvad

Python interface to the WebRTC Voice Activity Detector

pymi

Python implementation of mutual information calculation using B-spline from Daub et. al.

sgehtseqcount

Course project for Computational Genomics, Spring 2011

stm_clearscience

Source code for creating figures in STM paper

synapseccle

R source script for creating Synapse CCLE drug response project page ( https://www.synapse.org/#!Synapse:syn1917667 )

synapsetcgapancan

Scripts for creating figures for TCGA pan cancer datasets

uva

Coding practice -- UVa online judge

varex

varnorm