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basset

Convolutional neural network analysis for predicting DNA sequence activity.

bi-lstm-crf-ner-tf2.0

Named Entity Recognition (NER) task using Bi-LSTM-CRF model implemented in Tensorflow 2.0(tensorflow2.0 +)

blog-demos

这个代码仓库里是博客中涉及的源码、文件等 ；如果对您有帮助，请给个Star，感谢~

daily-work-script

这个项目主要存储日常工作中写的一些临时的脚本

desso

A DL-based framework for sequence and shape motif identification in the human genome

diploshic

discoal

discoal is a coalescent simulation program capable of simulating models with recombination, selective sweeps, and demographic changes including population splits, admixture events, and ancient samples

graduation-thesis

The project documents the relevant data results and analysis procedures for the graduation thesis

gwasqq.plot

jekyll-base

ld-decay-calculating

machine-learning-study-path-march-2019

A complete ML study path, focused on TensorFlow and Scikit-Learn

manhattan_qq_plot

mp_ath_analysis

learning the sNucRNA and sNucATAC data analysis

myfirst

plantbind

A tool for predicting transcription factor binding sites in plants

r-cmplot

:four_leaf_clover:Circular Manhattan Plot

r-plotting

readbulk

Read and Combine Multiple Data Files

rehh_helper

Convenience scripts for preparing vcf files for input into rehh

rice_annotation

scripts

Scripts to handle NGS data and other biological data

self-attentive-emb-tf

Simple Tensorflow Implementation of "A Structured Self-attentive Sentence Embedding" (ICLR 2017)

self-attentive-tensorflow

Tensorflow implementation of "A Structured Self-Attentive Sentence Embedding"

selscan

Haplotype based scans for selection

sibelia

Genome comparison via de Bruijn graph. To get the latest stable version, please visit our site.

similarityregression

Predicting TF sequence-specificity similarity with weighted alignments

snucrna_atac_scripts

scripts in support of "Single-nucleus RNA and ATAC sequencing reveals the impact of chromatin accessibility on gene expression in Arabidopsis roots at the single-cell level"

tensorflow_seq2seq

Tensorflow中的Seq2Seq全家桶

vcf-to-hapmap