wtsi-hpag Goto Github PK
Name: wtsi-hpag
Type: Organization
Bio: Software tools and pipelines developed by the High Performance Algorithms Group @ the Wellcome Sanger Institute
Name: wtsi-hpag
Type: Organization
Bio: Software tools and pipelines developed by the High Performance Algorithms Group @ the Wellcome Sanger Institute
Pipeline to bin 10X, HiC, PacBio and ONT reads based on ancestry assemblies
CAUS is a pipeline for Chromosome Assignment Using Synteny
A Size and Positional Analysis (SPA) tool for studying chromothripsis breakages.
A statistical tool for analysing the Contact Point hypothesis for Chromothripsis
A Workshop Notebook used for running a session as part of the OpenLab series.
Pipeline for building SNP and GAP pileup from multiple COVID-19 whole genome sequences.
A Bayesian method to smooth-out the noise in a coverage dataset, revealing the underlying average behaviour which is constrained to lie on `Harmonics' of a fundamental coverage value.
easyChain is a pipeline to produce a chain file from two genome assemblies.
HiC alignment and classification pipeline
Coverage Analysis Tools
A Bayesian Statistical Inference framework for comparing hypotheses
Collect and process statistics from aligned linked-reads.
An MCMC Sampling framework for sampling from arbitrary probability densities.
Process haplotag barcodes in SAM format
Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads
Pipeline for genome scaffolding by modelling distributions of HiC pairs
Pipeline for scaffolding genome assemblies using haplotagging reads
Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.
Generic wrapper program, detects SIMD CPU extensions and launches an appropriate sub-process.
SMIS: Single Molecular Integrative Scaffolding. A pipeline for scaffolding genome assemblies using long reads (PacBio, ONT)
A pipeline for identification of chromothripsis breakpoints and cancer rearrangements
A pipeline to correct variation errors of SNPs/indles from genome assembly
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.