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anti-pd1_escc

bcaller

Bladder Cancer Index Caller

hccpirs

Replication stress-related prognostic index in HCC

imes

Index of methylation-based epigenetic silencing

ml4calibrated450k

This is a companion repository for the article "Comparative analysis of machine learning classifiers and calibration algorithms for estimating class probabilities for personalized cancer diagnostics on DNA methylation microarray data"

mnp_training

DNA methylation-based classification of central nervous system tumours

movics

Multi-Omics integration and VIsualization in Cancer Subtyping

movicshiny

ngs-analysis

二代测序数据分析

oncopredict

pcsig

pozniak-et-al

refinemibc

Refinement of muscle-invasive bladder cancer based on transcriptome classifiers.

scclassifr

An R package to automatically classify cell types in scRNA-seq datasets. Supports Seurat and SingleCellExperiment class

scendo_scovar_2020

This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignancies", Regner et al., 2021

scrnaseq-sl

single-nuclei-epigenomic-and-transcriptomic-landscape-in-alzheimer-disease

Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease

utuc

Comprehensive Integrative Profiling of Upper-tract Urothelial Carcinomas

wts

Code relevant to "Delineating the Interplay Between Oncogenic Pathways and Immunity in Anaplastic Wilms Tumors: Implications for Prognosis and Therapeutic Vulnerability"