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aae_pytorch

acfs

Automatically exported from code.google.com/p/acfs

adage

This is the repository for ADAGE (Analysis using Denoising Autoencoders for Gene Expression)

alphago

A replication of DeepMind's 2016 Nature publication, "Mastering the game of Go with deep neural networks and tree search," details of which can be found on their website.

applied-computational-genomics

Applied Computational Genomics Course at UU: Spring 2017

attention-transfer

Improving Convolutional Networks via Attention Transfer

auto-sklearn

awesome-deepbio

A curated list of awesome deep learning applications in the field of computational biology

awesome-rnn

Recurrent Neural Network - A curated list of resources dedicated to RNN

awesome-tensorflow

TensorFlow - A curated list of dedicated resources http://tensorflow.org

azimuth

Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency

basset

Convolutional neural network analysis for predicting DNA sequence activity.

bayes_logistic

Bayesian Logistic Regression using Laplace approximations to the posterior.

betago

BetaGo: AlphaGo for the masses, live on github.

black-boxxy

Some experiments into explaining complex black box ensemble predictions.

blog

for code created as part of http://studywolf.wordpress.com

boruta_py

Python implementations of the Boruta all-relevant feature selection method.

bytenet

A tensorflow implementation of French-to-English machine translation using DeepMind's ByteNet .

cleverhans

A library for benchmarking vulnerability to adversarial examples

clustering_on_transcript_compatibility_counts

Clustering cells from single cell RNA seq assays

cnn-att

convnet-benchmarks

Easy benchmarking of all public open-source implementations of convnets

convnets-keras

coolplayspark

酷玩 Spark

corex

CorEx or "Correlation Explanation" constructs a hierarchy of maximally informative representations of complex data.

courseraml

I'm taking Andrew Ng's Machine Learning course on Coursera and doing the homework assigments... but, on my own in python because Octave? Really?

crisporpaper

Code for the CRISPOR article, all data and code to create figures and analysis

danq

A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences

dashr

data-science-ipython-notebooks

Continually updated data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe), scikit-learn, Kaggle, Spark, Hadoop MapReduce, HDFS, matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines. https://bit.ly/data-notes