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安迪君's Projects

autopvs1 icon autopvs1

An automatic classification tool for PVS1 interpretation of null variants

bioplot icon bioplot

High imitation some bioinformatics tools result by python matplotlib.

circle-map icon circle-map

A method for circular DNA detection based on probabilistic mapping of ultrashort reads

circlehunter icon circlehunter

A pipeline for identifying complex ecDNA using ATAC-Seq data.

dapipe icon dapipe

自动化的 ATAC-Seq 分析流程

depipe icon depipe

自动化的 ChIP-Seq 分析流程

dlpipe icon dlpipe

一个全自动,可断点续传的从 GEO 数据库下载原始 FASTQ 文件的流程。

docker_image_pusher icon docker_image_pusher

使用Github Action将国外的Docker镜像转存到阿里云私有仓库,供国内服务器使用,免费易用

dxpipe icon dxpipe

自动化的 RNA-Seq 分析流程

pepatac icon pepatac

A modular, containerized pipeline for ATAC-seq data processing

sci-plot-example icon sci-plot-example

A simple framework for generating academic publication-ready figures directly using Matplotlib.

scikit-allel icon scikit-allel

A Python package for exploring and analysing genetic variation data

spiders icon spiders

自己写的一些爬虫,一是为了备份,二是分享。Some web spiders, for backup and share.

spidry icon spidry

A flask like web spider framework.

spliceai icon spliceai

A deep learning-based tool to identify splice variants

youtube-dl icon youtube-dl

Command-line program to download videos from YouTube.com and other video sites

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