yatisht Goto Github PK
Name: Yatish Turakhia
Type: User
Company: UC San Diego
Twitter: yatishturakhia
Yatish Turakhia's Projects
aws-fpga
Official repository of the AWS EC2 FPGA Hardware and Software Development Kit
bioconda-recipes
Conda recipes for the bioconda channel.
coursera-sdaccel-theory
Source codes used during the Coursera course titled "Developing FPGA-accelerated cloud applications with SDAccel: Theory"
coveme
Docker environment for COVEME
cppbestpractices
Collaborative Collection of C++ Best Practices
darwin
Darwin: A co-processor for long read alignment
darwin-wga
Co-processor for whole genome alignment
dozeu
SIMD-parallel BLAST X-drop DP on sequence graphs
gprof2dot
Converts profiling output to a dot graph.
hal
Hierarchical Alignment Format
hcoerosions
kent
UCSC Genome Browser source tree. Stable branch: "beta".
kubernetes
Various snippets and tooling to use a kubernetes cluster
ncov
Nextstrain build for novel coronavirus SARS-CoV-2
pycogent
PyCogent: Official repository for software and unit tests
riscv-boom
SonicBOOM: The Berkeley Out-of-Order Machine
segalign
A Scalable GPU System for Pairwise Whole Genome Alignments
shasta
De novo assembly from Oxford Nanopore reads.
strain_phylogenetics
Tools for analyzing and comparing SARS-CoV-2 phylogenies
usher
Ultrafast Sample Placement on Existing Trees
veme2021
vim
vitis-hls-introductory-examples
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