Comments (2)
My bad, it was a typo in the ReadMe: the order must be supplied by the option -r
as depicted in the help message:
Scyland3D: Processing 3D landmarks.
optional arguments:
-h, --help show this help message and exit
-i INDIR, --indir INDIR
the input directory containing the landmarks to
process
-o OUTDIR, --outdir OUTDIR
the output directory containing the landmarks to
process
-m MIRROR_FACTOR, --mirror_factor MIRROR_FACTOR
the factor to be used when mirroring the corresponding
landmarks
-r ORDER, --order ORDER
the new order to apply to the landmarks
-f ORDER_FACTOR, --order_factor ORDER_FACTOR
the factor to be used when reordering the
corresponding landmarks
-n FEATURE_NAMES, --feature_names FEATURE_NAMES
the feature names to use in the header in the output
file
-v, --verbose whether to output the processing steps
The -o
specifies the output file. The ReadMe has been fixed.
from scyland3d.
Ah yes, this fixes it, thanks!
from scyland3d.
Related Issues (13)
- Running without arguments fails HOT 4
- Having trouble running Scyland3D when installed from pip HOT 6
- AssertionError when running tests HOT 12
- Mistake / old information in Readme for command-line arguments HOT 8
- Community guidelines HOT 1
- statement of need HOT 1
- Dependencies HOT 1
- Example usage HOT 2
- API documentation
- private functions HOT 1
- Comments in code HOT 7
- CSV output HOT 3
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from scyland3d.