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Name: yimsea
Type: User
Name: yimsea
Type: User
Annotation and Image Markup (AIM) is the first project to propose and create a standard means of adding information and knowledge to an image in a clinical environment, so that image content can be easily and automatically searched.
Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.
A powerful toolset for genome arithmetic.
BLASR: The PacBio® long read aligner
A method to identify structural variation from sequencing data in target regions
Scripts for processing PacBio transcriptome (Iso-Seq) data
Classifier for metagenomic sequences
ChimPipe: Accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data
CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.
Quality control of fastq and bam files at cohort level
Repository for CWL Specifications. Use https://www.biostars.org/t/cwl/ for support.
Co-Expression Analysis of Sequencing Data
A JavaScript visualization library for HTML and SVG.
Accurate sample inference from amplicon data with single nucleotide resolution
The DevNet project on github stores the PacBio DevNet website.
EMSAR quantifies transcripts from RNA-seq data (Citation : Lee et al., BMC Bioinformatics 2015, 16:278, http://www.biomedcentral.com/1471-2105/16/278)
Ultra Fast NGS Data QC Tool
Bayesian haplotype-based polymorphism discovery and genotyping.
g3plot release 1 from intel
PacBio® variant and consensus caller (Quiver algorithm)
Query Google Scholar with Python
Hierarchical based assembler development toolkit
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis method that aids interpretation of large-scale gene expression data. The method introduced here includes coexpression analysis and gene importance estimation to robustly identify relevant pathways and biomarkers for patient stratification.
JAFFA is a multi-step pipeline that takes either raw RNA-Seq reads, or pre-assembled transcripts, then searches for gene fusions
A Linear Discriminant Analysis Effect Size (LEfSe) wrapper.
An ebook reader application supporting PDF, DjVu, EPUB, FB2 and many more formats, running on Cervantes, Kindle, Kobo, PocketBook and Android devices
Analysis toolkit and programming library for k-mer profiles
Learn Python 3 Sample Code
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.