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USC_ZK's Projects

edep-sim icon edep-sim

An energy deposition simulation based on G4. The default output is a ROOT tree, but the simulation can also be directly called as a library.

fractaldna icon fractaldna

Python routines for generating simple models of DNA

gate icon gate

Official public repository of Gate

geant4-gpu icon geant4-gpu

Port existing GEANT4 particle simulation code to make use of GPU computational power. Software will be used to study particle interactions in a variety of contexts at McMaster and beyond.

hifi icon hifi

Hi-C Interaction Frequency Inference (HIFI): High-resolution estimation of DNA-DNA interaction frequency from Hi-C data

moloculeparser icon moloculeparser

Using Blender and Python Scripting to create 3D molecule models

topas-nbio icon topas-nbio

TOPAS-nBio extension repository, for documentation and license see: https://topas-nbio.readthedocs.io/

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