youyupei Goto Github PK
Name: Yupei You
Type: User
Company: Walter and Eliza Hall Institute of Medical Research
Location: Melbourne, Australia
Yupei You's Projects
ai-for-beginners
12 Weeks, 24 Lessons, AI for All!
awesome-nanopore
A curated list of awesome nanopore analysis tools.
bc_whitelist_analysis
Analysis script for BLAZE paper
blaze
SingleCell Nanopore sequencing data analysis
buttery-eel
The buttery eel - a slow5 guppy basecaller wrapper
cdna_cupcake
Miscellaneous collection of Python and R scripts for processing Iso-Seq data
demuxlet
Genetic multiplexing of barcoded single cell RNA-seq
discoant
fast_edit_distance
A quick implementation of edit distance with improved runtime.
flames
nanoisoform
Tools for Isoform identification using Oxford Nanopore Sequencing
nanosplicer
slsim
Simulate 10X single cell nanopore reads
sockeye
Single Cell Transcriptomics
starcode
All pairs search and sequence clustering
tombo
Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.
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