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anti-pd1_escc

Progenitor-like exhausted SPRY1+CD8+T cells potentiate responsiveness to neoadjuvant PD-1 blockade in esophageal squamous cell carcinoma

ccrcc_multiomics

Multi-omic profiling ofclear cell renal cell carcinoma identifies metabolic reprogramming associated with disease progression

fg-lab

Cross-tissue single-cell landscape of human monocytes and macrophages in health and disease

golp_code

Macro CD5L+ deteriorates CD8+T cells exhaustion and impairs combination of Gemcitabine-Oxaliplatin-Lenvatinib-anti-PD1 therapy in intrahepatic cholangiocarcinoma

hbca

Code used to process the data of the HBCA project

hnscc_scrna

Single cell deciphering of progression trajectories of the tumor ecosystem in head and neck cancer

human_embryo

An immune cell atlas reveals the dynamics of human macrophage specification during prenatal development

luad_code

An atlas ofepithelial cell states and plasticity in lung adenocarcinoma

parturition_paper

Deciphering maternal-fetal cross-talk in the human placenta during parturition using single-cell RNA sequencing

reproduction

scell_lung_adenocarcinoma

This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset

scpdac

R code used to analyze single cell PDAC data

scrna-seq_atlas_hs_pbmc_aging

10.1016/j.immuni.2023.10.013

singlecellcrc-pipeline

Analytical pipeline of scRNA-seq and spatial transcription datastes of CRC

spatial-bonemarrow-atlas

This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Proteomic Profiling Reveals the Cellular Composition and Spatial Organization of the Human Bone Marrow Microenvironment"

spatial_brain_cancer

Spatial architecture of high-grade glioma reveals tumor heterogeneity within distinct domains

tib

A blueprint for tumor-infiltrating B cells across human cancers