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firecaller

FIREcaller: an R package for detecting frequently interacting re-gions from Hi-C data

ismnn

iSMNN: Batch Effect Correction for Single-cell RNA-seq data via Iterative Supervised Mutual Nearest Neighbor Refinement

munin

MUNIn (Multiple tissue UNifying long-range chromatin Interaction detector): a statistical framework for identifying long-range chromatin interactions from multiple tissues/samples

safeclustering

SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data

sameclustering

SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data

scatac_analysis_pipleline_for_zebrafish_heart_regeneration

smnn

SMNN: Batch Effect Correction for Single-cell RNA-seq data via Supervised Mutual Nearest Neighbor Detection

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