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Tong Zhu's Projects

3d-dart icon 3d-dart

Standalone code for 3D-DART (originally developed by Marc van Dijk)

3dmol.js icon 3dmol.js

WebGL accelerated JavaScript molecular graphics library

accdb icon accdb

A Computational Chemistry DataBase

ase_ani icon ase_ani

ANI-1 neural net potential with python interface (ASE)

autochem icon autochem

tools for manipulating molecular descriptors

awesome-english-ebooks icon awesome-english-ebooks

经济学人(含音频)、纽约客、卫报、连线、大西洋月刊等英语杂志免费下载,支持epub、mobi、pdf格式, 每周更新

bagel icon bagel

Brilliantly Advanced General Electronic-structure Library

biomedr icon biomedr

generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.

ccompilerx icon ccompilerx

Chemical Compiler to convert C like code to CAIN XML file

cp2k icon cp2k

Quantum chemistry and solid state physics software package

d2l-pytorch icon d2l-pytorch

This project reproduces the book Dive Into Deep Learning (www.d2l.ai), adapting the code from MXNet into PyTorch.

d2l-zh icon d2l-zh

《动手学深度学习》:面向中文读者、能运行、可讨论。英文版即伯克利“深度学习导论”教材。

deepmd-kit icon deepmd-kit

A deep learning package for many-body potential energy representation and molecular dynamics

deeptime icon deeptime

Deep learning meets molecular dynamics.

dive-into-dl-pytorch icon dive-into-dl-pytorch

本项目将《动手学深度学习》(Dive into Deep Learning)原书中的MXNet实现改为PyTorch实现。

dscribe icon dscribe

DScribe is a python package for creating machine learning descriptors for atomistic systems.

equiformer_v2 icon equiformer_v2

[arXiv'23] EquiformerV2: Improved Equivariant Transformer for Scaling to Higher-Degree Representations

examples icon examples

Fortran and Python examples to accompany the book "Computer Simulation of Liquids" by Michael P. Allen and Dominic J. Tildesley (2nd edition, Oxford University Press, 2017). Use the "Clone or download" button, or follow the "...releases" link below.

ferminet icon ferminet

An implementation of the Fermionic Neural Network for ab-initio electronic structure calculations

gnnpapers icon gnnpapers

Must-read papers on graph neural networks (GNN)

graphormer icon graphormer

Graphormer is a general-purpose deep learning backbone for molecular modeling.

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