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brain_organization

Maps of cortical organization

cc_reading_prediction

Codes of our paper on Cerebral Cortex. Python/Matlab functions and scripts for elastic-net prediction (both 3F-CV and A-Predict-B) with inner 3F-CVs for parameter selection.

function_connectivity

Matlab code for calculating functional connectivity.

hbm_dyslexia_classification

Matlab codes for our paper on Human Brain Mapping. Nested linear SVM & logistic classification (inner cross validation for P threshold selection, outer cross validation for classifier evaluation).

panda

Pipeline software "Pipeline for Analyzing braiN Diffusion imAges" for processing diffusion MRI data.

pattern_classification

Matlab codes of pattern classification algorithms (e.g., SVC, logistic regression, MLDA) for analyzing brain imaging data.

pattern_regression

Codes for our paper on NeuroImage - comparison of pattern regression algorithms and evaluation of sample size impact.

pattern_regression_clean

Codes for pattern regression with detailed manual

pattern_regression_matlab

Matlab codes for support vector regression (SVR) and revelance vector regression (RVR) analysis with cross validation to evaluate the prediction power.

pnccontrolenergy

The scripts of control energy analysis on pnc dataset (1st revision)

pncsinglefuncparcel

Codes for the project "development of functional topography"

pncsinglefuncparcel_old

Codes for the project: development of functional topography

pncsinglefuncparcel_psychopathology

Codes for the project "Linking Individual Differences in Personalized Functional Network Topography to Psychopathology in Youth"

svm_based_searchlight

Matlab code for support vector machine (SVM) based searchlight analysis of brain map.

tutorial