zeyaxue Goto Github PK
Name: Zeya Xue
Type: User
Company: UC Davis
Bio: Bioinformatics postoc - R - NGS - Statistics - Bioinformatics - Microbiome
Name: Zeya Xue
Type: User
Company: UC Davis
Bio: Bioinformatics postoc - R - NGS - Statistics - Bioinformatics - Microbiome
Metagenomic analysis workflow for the identification and quantification of antimicrobial resistance genes (ARG) from human stool samples..
BLAST output to dictionary to heatmap
The second version of the Kraken taxonomic sequence classification system
A repository for Marco lab to store and share work-in-progress scripts for data analysis and visualization in R, python or other languages. The final code for publication can be viewed at repos that linked with paper.
Visualization codes from the 2nd "speeding up science workshop". This repository contains codes to plot and calculate correlation (linear regression) between metagenomic and metatranscriptomic sequencing results acquired from the same sample.
Visualization codes from the first "speeding up science workshop". This repository contains codes to make heatmap and stacked bar plots for metatranscriptomic function and RNA-based taxonomy summaries.
This repo is for demonstration purposes only.
This repository is intended to use as a demo about how I organize my research projects: from data to manuscript.
The personal website of Zeya Xue.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
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Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.