Zhilong's Projects
Proteomic and clinical biomarkers for acute mountain sickness in a longitudinal cohort
GNU awk libraries
BWK awk modified for biological data
What the Package Does (Title Case)
CGM δΈ»η«
Validation of Clustering Results
CMAP in R
co-expressed gene-set enrichment analysis
Package corrplot is for visualizing a correlation matrix
Transcriptome-based drug repositioning for coronavirus disease 2019 (COVID-19)
R notebooks for the code samples of the book "Deep Learning with R"
DEP package
Discriminant Nonnegative Matrix Factorization
A knowledge graph and a set of tools for drug repurposing
Drug-Target Interaction Prediction: End-to-End Deep Learning
A Network Integration Approach for Drug-Target Interaction Prediction
Python script to use enrichr from command line (http://amp.pharm.mssm.edu/Enrichr/)
Time-course Transcriptome Analysis for Drug Repositioning in Fusobacterium nucleatum-infected Human Gingival Fibroblasts
Visualising data frames as funky heatmaps π
Gene Data Explorer
Gene Expression Signature based Similarity Metric (GSEA, PGSEA, ScoreX)
Gene Ranking of RNA-seq data via Discriminant Non-negative Matrix Factorization
The bridge between the NCBI Gene Expression Omnibus and Bioconductor
GREIN : GEO RNA-seq Experiments Interactive Navigator
heatmap3 is an improved heatmap package. It is completely compatible with the original R function heatmap, and provides some more powerful and convenient features.
System for storing, analyzing and visualizing chemical bioactivity data
Information-Theoretic Measures
bioinformatics scripts and scratch code