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ziyili20's Projects

bigpipeline icon bigpipeline

storage for the materials of Ziyi's chapter(s) for BIG pipeline

camlu icon camlu

Cell Annotation using Machine Learning-based method for the presence of Unknown cells (CAMLU)

caroc icon caroc

A package for assessment of continuous biomarkers.

deep_lda icon deep_lda

Implementation of Deep Linear Discriminant Analysis (DeepLDA)

gbc icon gbc

Generalized Biclustering

neuca icon neuca

Neural-network based Cell Annotation tool

partcnv icon partcnv

An R package to improve the detection of locally aneuploid cells by incorporating cytogenetics information.

regionalst icon regionalst

Investigating regions of interest and performing cross-regional analysis with spatial transcriptomics data

scats icon scats

A statistical tool to detect differential alternative splicing events using single-cell RNA-seq

toast icon toast

Tools for the analysis of heterogeneous tissues

transcox icon transcox

Provide transfer learning-based Cox Proportional Hazards model

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