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anaysis_code

circrna-pipeline

pipelines to process and analysis circular RNAs

circrnafinder

a tool for identifying circular RNAs using RNA-Seq data

ciriquant

circular RNA quantification tools

clear

direct comparison of circular and linear RNA expression

gatk4-data-processing

Workflows for processing high-throughput sequencing data for variant discovery with GATK4 and related tools

gatk_demo

a gatk4 pipeline with NA12878 demo dateset ,conda environment used(no GPU)

geo

ilus

A whole genome re-sequencing data analysis pipeline

learn-bioinformatics

liu2020proteincell

Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome

lncrna

mirdeep2

Discovering known and novel miRNAs from small RNA sequencing data

mirnaseq-pipeline

my-r

a small collection for my R scripts

my_wgcna

n_door

ngs-pipeline

By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

pipeline-mirna

miRNA pipeline

python-100-days

Python - 100天从新手到大师

research_pipline

rmats2sashimiplot

rna-seq

RNA-seq analysis

rna-seq-model-organism-arabidopsis-thaliana

RNA Seq Model Organism Arabidopsis thaliana using paired end reads

scrna_smart_seq2

seq-format-conversion

Workflows for converting between sequence data formats

smallrna_nf

smrnaseq

A small-RNA sequencing analysis pipeline

somatic-combiner

tcga_example