0mician Goto Github PK

mvdataexploration

Multivariate dataset exploration

neraks

Old university project (RT operating system)

old_dotfiles

my dotfiles and other etcs

phaster_scripts

Small utility script to submit genomes to PHASTER for phage detection

phigaro

Phigaro is a scalable command-line tool for predictions phages and prophages from nucleid acid sequences (including metagenomes) and is based on phage genes HMMs and a smoothing window algorithm.

prophet

pycrispr

Implementation of a CRISPR detection tool in python

r-plotting

Project from the datascience specialization on Coursera

rbtree

Red Black Tree implementation in Java (old uni project)

saspector

saspector-1

SASpector: a tool for analysis of missing regions in (bacterial) draft genomes

scriptsas

Collection of misc. scripts for systems administration

se-mei

Tools for finding mobile element insertions from single-end datasets (slightly modified to get qname instead of tname)

sga

de novo sequence assembler using string graphs

svm-classification

Using least squares support vector machine (LS-SVM) for classification problems

svm-funtimes

Using least squares support vector machine (LS-SVM) for function estimation and time series prediction

svm-unsupervisedlearning

Using least squares support vector machine (LS-SVM) for unsupervised learning, kernel PCA

tangodjango

Tango with django

tango_with_django_19

A beginners guide to web programming with Python / Django 1.9

testing-jekyll

Testing jekyll for website deployment

theomicians

Project for the class "Omics technique and data analysis" @KU Leuven (Spring 2015)

udsa

Ultra Deep Sequence Assembler, a fork of the UDS assembler "Slicembler"

uglypopcorn

Old university project using MPI (RT operating system)

virsorter

Source code of the VirSorter tool, also available as an App on CyVerse/iVirus (https://de.iplantcollaborative.org/de/)

websitebbc

New website of the Belgian Brain Council (prototype, was not deployed in the end)

whovisualization

Visualization of the WHO dataset