GithubHelp home page GithubHelp logo

About

I am a Research Software Engineer and full-stack web developer. I design and implement solutions to help teams understand complex datasets and collaborate across many fields of study. My collaborators have included physical scientists, biologists, and automotive engineers, among many others.

External: Publications - LinkedIn

A few previous projects

I have been fortunate to work on a number of small teams with outsized impact:

  • my.locuszoom.org: The field standard for visualizations to show genetic research findings in context. A web based service that asynchronougly ingests user-provided data, applies an annotation pipeline, and enables sharing of harmonized published datasets to the global community. Permissively licensed: use the entire site, or just the modular components and customize to your needs.
  • TOPMed Imputation Server: Provides high-quality "big data" scientific workflows in a protected AWS compute environment. By providing genotype imputation, we can enable drastically more cost effective research and lower the barriers to entry.
  • Open Science Framework / OSF Preprints: Upload articles and datasets to share and get a DOI. Data sharing and collaboration features.
  • Genes for Good, MIT Lookit, and others: Recruit diverse audiences nationwide to help contribute to better, more representative research. Surveys, videos, and other capabilities

For more projects, browse the list of public repositories I have worked on!

Ask me about

  • Bringing software engineering best practices into the R&D space (a few example presentations)
  • Leveraging new technologies to foster better insights. I like learning something new!
  • Combining metrics and user insights to deliver the right features at the right time
  • Architecture (front and backend)

Things I enjoy

  • Working with great collaborators and learning something new
  • Choosing the right technologies to deliver impactful solutions
  • Making things a little better every day: software testing, usability, and driving continuous improvement across teams

Andy Boughton's Projects

jam-setup icon jam-setup

A basic script for bootstrapping JamDB namespaces and collections.

localzoom icon localzoom

Make interactive LocusZoom plots from a GWAS file

locuszoom icon locuszoom

A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

modular-odm icon modular-odm

A database-agnostic Object-Document Mapper for Python.

msword_freq_analysis icon msword_freq_analysis

Extract words from MS Word files, transform counts to JSON format, and organize documents into groups

ori_openforensicactions icon ori_openforensicactions

Detect image fraud via recoloring: matplotlib and web tools inspired by ORI advanced forensic actions. Not affiliated with or endorsed by ORI etc.

osf_oauth2_demo icon osf_oauth2_demo

Simple demonstration of the OAuth2 client flow for connecting to the OSF

paperbadger icon paperbadger

Exploring the use of digital badges for crediting contributors to scholarly papers for their work

particle-clicker icon particle-clicker

An addictive incremental game that teaches players the history of high energy particle physics

pheweb icon pheweb

A tool to build multi-phenotype GWAS browsers

polls_ccs_2015_02_14 icon polls_ccs_2015_02_14

A simple interactive Flask poll application, created for use with React.js day at Ann Arbor Code Craftsman Saturdays (Feb 2015)

pubmed-es-expts icon pubmed-es-expts

Demo ingestion and visualization for Pubmed open access content via ElasticSearch and d3js

raremetal2 icon raremetal2

An updated version of meta-analysis software Raremetal

rer_calculator icon rer_calculator

Resting energy requirement (RER) calculator for canine feeding. Developed for the Foundation for Service Dog Support (FSDS).

studygrouplessons icon studygrouplessons

One-hour introductory lessons on ideas and tools in coding and data wrangling for research.

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.