adammarblestone-zz / simple-c-elegans

Minimalist Python code -- based on OpenWorm and the published literature -- for modeling C. elegans neural network dynamics

simple-C-elegans

Minimalist Python code, based on OpenWorm and the published literature, for modeling C. elegans neural network dynamics

Key sources include:

http://www.openworm.org

Kunert, James, Eli Shlizerman, and J. Nathan Kutz. "Low-dimensional functionality of complex network dynamics: Neurosensory integration in the Caenorhabditis elegans connectome." Physical Review E 89.5 (2014): 052805. http://arxiv.org/abs/1310.6689

Wicks, Stephen R., Chris J. Roehrig, and Catharine H. Rankin. "A dynamic network simulation of the nematode tap withdrawal circuit: predictions concerning synaptic function using behavioral criteria." The Journal of neuroscience 16.12 (1996): 4017-4031. http://www.jneurosci.org/content/16/12/4017.short

simple-c-elegans's Issues

How to run this code

Hi! Is that using "python SimulateConnectome.py" to run the code?