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gse2srr's Introduction

gse2srr.sh : a portable script to convert IDs from GSE to SRR

2023-03-18.055417.mp4

Features

Installation

wget https://raw.githubusercontent.com/akikuno/gse2srr/main/gse2srr.sh

Usage

sh gse2srr.sh <GSE Number>

Example

sh gse2srr.sh GSE199916
# SRR18579290
# SRR18579291
# SRR18579292
# SRR18579293
# SRR18579294
# SRR18579295
# SRR18579296
# SRR18579297

Other tools

  • prjna2srr.sh: to convert PRJNA (BioProject accession ID) to SRR

Questions and bug reporting

Questions, bug reporting or any inqueries are always welcome!
Please reprt to the GitHub Issues

  • Questions by creating a new issue with the question tag
  • Bugs by creating a new issue with the bug tag

gse2srr's People

Contributors

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Watchers

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