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aipnd-project

Project code for AI Programming with Python ND Program

alaaalatif.github.io

Repo for Github Web Page

basic_latex

A Concise Introduction to Basic LaTeX inside Jupyter Notebooks

bjorn

basic scripts for automated data handling of SARS-CoV-2 samples for release

bwa_pipeline

carnet

This is code from the Car-Net project. The project aim was to build a classifier that can identify the make of a car from its image using deep learning.

covid

This is a general repository containing all computational work related to the COVID-19 pandemic and the associated Sars-Cov-2 virus.

deep-learning-fundamentals

This repository will contain all my work on the fundamentals of deep learning. These will usually involve basic implementations of deep learning methods using Python's Numpy library.

deep-learning-specialization-coursera

Deep Learning Specialization by Andrew Ng on Coursera.

deep_gmm

This should contain the source code and data files for a predictive dynamic stochastic process model. It relies on feature representation of output using GMMs, and a deep network for predicting GMM parameters of unseen inputs.

fastai

The fast.ai deep learning library, lessons, and tutorials

fsdl-text-recognizer-project

Full Stack Deep Learning Bootcamp Project (Public)

ivar

iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing.

lasagne

Lightweight library to build and train neural networks in Theano

mpbindv3

msds_spark_project

Spark team project using WESAD data for Stress Detection

nblite

Open and Run Notebooks on the Browser, powered by PyScript [mirror from https://gitlab.com/eduardobonet/nblite]

neuralattention_for_rte

nlp-project

RTE using LSTMs. Project For COL772: Natural Language Processing

rcnn

Recurrent & convolutional neural network modules

reasoning_attention

Unofficial implementation algorithms of attention models on SNLI dataset

sc_rna_seq

A repository containing usable code for processing and analysis of single-cell RNAseq data

scikit-learn

scikit-learn: machine learning in Python

selex_sim_v0.1

selexim

A current working version of selexim - a software tool for simulating selex experiments.

selexim_v0.2

Numerical simulation of SELEX. In this updated version features are added to allow user to specify parameters through settings files. The user is also allowed to automatically post-process output results. Additionally, several bug fixes were performed.

simulations

streamhopperpublic

Public Version of our StreamHopper Repository

tcrnet

A software toolkit for processing and analyzing T-Cell Receptor (TCR) data.

virus-ancestry

A solution to the coding assignment for Andersen's lab.