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virus-ancestry's Introduction

virus-ancestry

A solution to the coding assignment for Andersen's lab.

INSTALL

git clone https://github.com/AlaaALatif/virus-ancestry.git

This tool was developed using Python 3.7.4.

Make sure the following Python packages are installed:

  • tarfile
  • path

USAGE

python main.py taxdump.tar.gz
Please Enter 1st Organism Name: Middle East respiratory syndrome-related coronavirus
Please Enter 2nd Organism Name: H1N1 swine influenza virus
Lowest Common Ancestor: Riboviria
# type 'quit' to exit program. Type anything else to continue
quit
Program Exit: Goodbye!

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