GithubHelp home page GithubHelp logo

andgoldschmidt / pyprotoclust Goto Github PK

View Code? Open in Web Editor NEW
5.0 5.0 0.0 6.47 MB

Python Prototype Clustering: an implementation of minimax linkage for hierarchical clustering

Home Page: https://pyprotoclust.readthedocs.io/en/latest/

Python 13.79% C++ 75.96% Cython 10.25%
hierarchical-clustering representative-data unsupervised-machine-learning

pyprotoclust's People

Contributors

andgoldschmidt avatar

Stargazers

avatar avatar avatar avatar avatar

Watchers

avatar avatar avatar avatar

pyprotoclust's Issues

Can't install the package

Thanks for sharing this package. I can't install the package via pip or setup package. could you help me in that?

  • pip install .

ERROR: Command errored out with exit status 1: /usr/bin/python3 /usr/local/lib/python3.6/dist-packages/pip/_vendor/pep517/_in_process.py prepare_metadata_for_build_wheel /tmp/tmpa8ydsv1m Check the logs for full command output.

  • with pip install pyprotoclust

ERROR: No matching distribution found for pyprotoclust

Installation problems [osx wheels requested]

Hello! Thanks for building and open-sourcing this :)

I'm trying to install this package with pip install pyprotoclust on my Apple Silicon machine using Python 3.9 within a conda environment and seeing the following output (even though setuptools is in fact installled)... If you had any ideas or suggestions about how I could get this installed, I'd appreciate it :)

Collecting pyprotoclust
  Using cached pyprotoclust-0.1.0.tar.gz (112 kB)
  Installing build dependencies ... done
  Getting requirements to build wheel ... done
  Preparing metadata (pyproject.toml) ... done
Requirement already satisfied: tqdm<5.0.0,>=4.46.0 in ./opt/miniconda3/envs/env/lib/python3.9/site-packages (from pyprotoclust) (4.63.0)
Building wheels for collected packages: pyprotoclust
  Building wheel for pyprotoclust (pyproject.toml) ... error
  error: subprocess-exited-with-error

  × Building wheel for pyprotoclust (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [25 lines of output]
      A setup.py file already exists. Using it.
      Traceback (most recent call last):
        File "/private/var/folders/20/zn579xsd7m3fm3yxbg9kkj640000gp/T/pip-install-hn3vumpf/pyprotoclust_5f2e121823764c21b428d4fbfc9ddfc7/setup.py", line 2, in <module>
          from setuptools import setup
      ModuleNotFoundError: No module named 'setuptools'
      Traceback (most recent call last):
        File "/Users/nicolas/opt/miniconda3/envs/env/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 363, in <module>
          main()
        File "/Users/nicolas/opt/miniconda3/envs/env/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 345, in main
          json_out['return_val'] = hook(**hook_input['kwargs'])
        File "/Users/nicolas/opt/miniconda3/envs/env/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 261, in build_wheel
          return _build_backend().build_wheel(wheel_directory, config_settings,
        File "/private/var/folders/20/zn579xsd7m3fm3yxbg9kkj640000gp/T/pip-build-env-4xd7s4i7/overlay/lib/python3.9/site-packages/poetry/core/masonry/api.py", line 68, in build_wheel
          return unicode(WheelBuilder.make_in(poetry, Path(wheel_directory)))
        File "/private/var/folders/20/zn579xsd7m3fm3yxbg9kkj640000gp/T/pip-build-env-4xd7s4i7/overlay/lib/python3.9/site-packages/poetry/core/masonry/builders/wheel.py", line 78, in make_in
          wb.build()
        File "/private/var/folders/20/zn579xsd7m3fm3yxbg9kkj640000gp/T/pip-build-env-4xd7s4i7/overlay/lib/python3.9/site-packages/poetry/core/masonry/builders/wheel.py", line 110, in build
          self._build(zip_file)
        File "/private/var/folders/20/zn579xsd7m3fm3yxbg9kkj640000gp/T/pip-build-env-4xd7s4i7/overlay/lib/python3.9/site-packages/poetry/core/masonry/builders/wheel.py", line 162, in _build
          self._run_build_command(setup)
        File "/private/var/folders/20/zn579xsd7m3fm3yxbg9kkj640000gp/T/pip-build-env-4xd7s4i7/overlay/lib/python3.9/site-packages/poetry/core/masonry/builders/wheel.py", line 190, in _run_build_command
          subprocess.check_call(
        File "/Users/nicolas/opt/miniconda3/envs/env/lib/python3.9/subprocess.py", line 373, in check_call
          raise CalledProcessError(retcode, cmd)
      subprocess.CalledProcessError: Command '['/Users/nicolas/opt/miniconda3/envs/env/bin/python', '/private/var/folders/20/zn579xsd7m3fm3yxbg9kkj640000gp/T/pip-install-hn3vumpf/pyprotoclust_5f2e121823764c21b428d4fbfc9ddfc7/setup.py', 'build', '-b', '/private/var/folders/20/zn579xsd7m3fm3yxbg9kkj640000gp/T/pip-install-hn3vumpf/pyprotoclust_5f2e121823764c21b428d4fbfc9ddfc7/build']' returned non-zero exit status 1.
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for pyprotoclust
Failed to build pyprotoclust
ERROR: Could not build wheels for pyprotoclust, which is required to install pyproject.toml-based projects

Package does not have Windows wheels

Hi! I am using Windows 10 and I am trying to install the package with:

pip install pyprotoclust

I have tried even creating different conda environments, but the same error always arrises:

Building wheels for collected packages: pyprotoclust
  Building wheel for pyprotoclust (pyproject.toml) ... error
  error: subprocess-exited-with-error

  × Building wheel for pyprotoclust (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [25 lines of output]
      A setup.py file already exists. Using it.
      Traceback (most recent call last):
        File "C:\Users\gorgo\AppData\Local\Temp\pip-install-54lp9uet\pyprotoclust_362cf845644e40b698d9726acc64ba2a\setup.py", line 2, in <module>
          from setuptools import setup
      ModuleNotFoundError: No module named 'setuptools'
      Traceback (most recent call last):
        File "D:\Programas\anaconda3\lib\site-packages\pip\_vendor\pep517\in_process\_in_process.py", line 363, in <module>
          main()
        File "D:\Programas\anaconda3\lib\site-packages\pip\_vendor\pep517\in_process\_in_process.py", line 345, in main
          json_out['return_val'] = hook(**hook_input['kwargs'])
        File "D:\Programas\anaconda3\lib\site-packages\pip\_vendor\pep517\in_process\_in_process.py", line 261, in build_wheel
          return _build_backend().build_wheel(wheel_directory, config_settings,
        File "C:\Users\gorgo\AppData\Local\Temp\pip-build-env-b672qip5\overlay\Lib\site-packages\poetry\core\masonry\api.py", line 68, in build_wheel
          return unicode(WheelBuilder.make_in(poetry, Path(wheel_directory)))
        File "C:\Users\gorgo\AppData\Local\Temp\pip-build-env-b672qip5\overlay\Lib\site-packages\poetry\core\masonry\builders\wheel.py", line 78, in make_in
          wb.build()
        File "C:\Users\gorgo\AppData\Local\Temp\pip-build-env-b672qip5\overlay\Lib\site-packages\poetry\core\masonry\builders\wheel.py", line 110, in build
          self._build(zip_file)
        File "C:\Users\gorgo\AppData\Local\Temp\pip-build-env-b672qip5\overlay\Lib\site-packages\poetry\core\masonry\builders\wheel.py", line 162, in _build
          self._run_build_command(setup)
        File "C:\Users\gorgo\AppData\Local\Temp\pip-build-env-b672qip5\overlay\Lib\site-packages\poetry\core\masonry\builders\wheel.py", line 190, in _run_build_command
          subprocess.check_call(
        File "D:\Programas\anaconda3\lib\subprocess.py", line 373, in check_call
          raise CalledProcessError(retcode, cmd)
      subprocess.CalledProcessError: Command '['D:/Programas/anaconda3/python.exe', 'C:\\Users\\gorgo\\AppData\\Local\\Temp\\pip-install-54lp9uet\\pyprotoclust_362cf845644e40b698d9726acc64ba2a\\setup.py', 'build', '-b', 'C:\\Users\\gorgo\\AppData\\Local\\Temp\\pip-install-54lp9uet\\pyprotoclust_362cf845644e40b698d9726acc64ba2a\\build']' returned non-zero exit status 1.
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for pyprotoclust
Failed to build pyprotoclust
ERROR: Could not build wheels for pyprotoclust, which is required to install pyproject.toml-based projects

I have checked my installation and setuptools is correctly installed. I have also tried with python -m pip install --upgrade pip setuptools wheel, and with python -m pip install --upgrade setuptools but they do not solve the problem either.

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.