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View Code? Open in Web Editor NEWSmooth particle hydrodynamics code for simulating phase transitions: my PhD research.
Smooth particle hydrodynamics code for simulating phase transitions: my PhD research.
RSPerator RMIT Smooth Particle Code v.1 - SPH/SPAM Material Simulator for CPU Copyright (C) 2011. Written by Andrew Charles under the guidance of Prof. Peter Daivis. RMIT University http:// ---------------- Lightning Start ---------------- > source phd.sh > rsprun.py <config_selection> <output_name> > reportgen.py <config_selection> <model_selection> ----------------- Package Overview ----------------- This software consists of the following main sections: config_lib: Configuration library for pyticles doc: Manually built (Sphinx) documentation. data: Output directory for simulation data exp: scripts for generating sets of experiments, and for copying data between machines. html: Auto generated documentation for python modules (Present?) fsp: Fortran smooth particle code pyticles: Python run control code for 3D systems splib: Python smooth particle library vdwlib: Library of routines and constants for van der Waals' equation of state. vsp: Visualisation and analysis ----------------- Package Details ----------------- Use build.sh to attempt to build all packages. Expect some configuration will be required so that all required compilers and libraries can be found on your system. config_lib: Configuration library for pyticles. - Groups of experiments ranging in size from tiny to expensive. - Virtually all relate to PhD investigation into condensation modelling. doc: Manually built (Sphinx) documentation. - Some automation of the build of Python documentation. - Notes on building some of the more troublesome dependencies. data: Output directory for simulation data - Not populated in the repository. - Most sub-packages expect to find data in this location - Location can be changed in phd.sh exp: scripts for generating sets of experiments, and for copying data between machines. - Customised shell and Python scripts. - Will be of use in determining how to do basic things. - Machine-specific. html: Auto generated documentation for python modules - Generated using docmake.sh fsp: Fortran smooth particle code - Stand alone. - Includes 2D run and visualisation system (fsp_post) - Includes library routines for 3D simulations - Supports custom formatted ASCII input/output See fsp/README_fsp.txt for more detail. pyticles: Python run control code for 3D particle systems - With realtime visualisation using OpenGL(experimental) - Output to netCDF structured format - Highly configurable, suitable for short and very long calculations - Depends on splib, fsp, vdwlib See pyticles/README for more detail splib: Python smooth particle library - Low level smooth particle interpolation calculations for modelling and visualisation. - Primarily implemented in Cython. vdwlib: Library of routines and constants for van der Waals' equation of state. See vdwlib/README_vdwlib for more details. vsp: Visualisation and analysis for smooth particles. Report based visualisation and plotting, along with simple calculations. Depends on fsp (python modules), vdwlib, splib, pyticles. See README_vsp for more details. worklog: An incomplete record of work and changes. ----------- Quick Start ----------- At the command line execute > source phd.sh or the equivalent in your shell. Take a look at this file to make sure directories are appropriate to your system. Then execute > rsprun.py <config_selection> <output_name> Where config_selection is the name of the configuration from config_library.py that you wish to load, and output_name is the name of the output file. To save your work, always use a different output name. To overwrite old work, simply use the same name as the config. This is the default behaviour if only a configuration is given. Add new configurations to config_library.py by extending existing ones and overriding the parameters you wish to change. ------------------- System requirements ------------------- Fortran compiler For example gcc's gfortran Older unices may not support some of the newer fortran 90 features required for this code. Steps to build gcc are in doc/build_gcc.txt but this is only expected to be required on old version of Linux. C compiler Python numpy Pyticles Cython VSP requirements scipy python-netcdf4 netCDF4 (to provide the tools like ncdump required to view the netcdf output data.) astropy now required? pyglet is required for some vsp modules and also the pyticles viewer. pygarrayimage PIL Mayavi is used for some 3D visualisation scripts. See doc/build_mayavi.txt
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