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q2-coordinates

methods for geographic mapping of qiime2 artifact data or metadata

q2-diversity

q2-feature-table

QIIME 2 plugin supporting operations on feature tables.

q2-katharoseq

qcli

Tools for developing and testing command line interfaces in Python.

qebil

qiime

Quantitative Insights Into Microbial Ecology (QIIME): Official repository for software and unit tests

qiime-deploy

Tool to easily install QIIME on Linux systems

qiime-deploy-conf

configuration files to be used with the qiime-deploy packages

qiime-workshops

Materials for biocore organized workshops

qiime.github.com

Webspace for QIIME

qiime2

Official repository for the QIIME 2 framework.

qiime_test_data

Test input and output for QIIME scripts.

qiimp

Web application to collect metadata specifications from an experimenter and produce metadata input files with appropriate constraints

qiita

Qiita - A QIIME databasing effort

qiita-files

File formats defined for Qiita and Qiita plugins internal use

qiita-paper

qiita_client

A python library that simplifies the communication between the plugins and Qiita's REST api

qp-deblur

qp-fastp-minimap2

Fast QC and host filtering for Whole Genome Sequencing and Metatranscriptomic sequencing

qp-knight-lab-processing

qp-meta

Qiita Woltka processing plugin with fast bowtie2 implemenetation

qp-qiime2

Qiime 2 plugin for Qiita

qp-shotgun

qp-spades

Qiita plugin to process metagenomic assemblies and isolates

qp-target-gene

qp-woltka

qtp-biom

qtp-diversity

Qiita Type Plugin for diversity types

qtp-job-output-folder