GithubHelp home page GithubHelp logo

clonal_mutations's Introduction

Inferring clonal somatic mutations directed by X chromosome inactivation status in single cells

This repository contain all code and analysis required to reproduce all the results in the manuscript Inferring clonal somatic mutations directed by X chromosome inactivation status in single cells. Ilke Demirci*, Anton J.M. Larsson*, Xinsong Chen, Johan Hartman, Rickard Sandberg# and Jonas Frisén#.

Each Jupyter notebook contains the code required to reproduce the figures the notebook is named after. For example, Fig1E_and_Supp_Fig_2.ipynb contains the code to reproduce Figure 2E and Supplementary Figure 2. The resulting PDF files are found in the folder figures. Data which does not require much space is found in data. Large files can be downloaded from zenodo at 10.5281/zenodo.7498777.

* These authors contributed equally

# Correspondence: [email protected]; [email protected]

clonal_mutations's People

Contributors

antonjmlarsson avatar

Watchers

 avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.