anybody-research-group / anypytools Goto Github PK

It could be convinient if the library could detect a messed up windows registry for AnyBody.

Then provide a suggestion for reinstalling AnyBody.

If for example the following key is empty

Computer\HKEY_CLASSES_ROOT\AnyBody.AnyScript\shell\open\command

Running the dump classoperation on a folder or folder reference causes this error in
_parse_anybodycon_output(strvar)

ValueError: malformed string

This can happen if we try to dump a variable with file path

Hello again,

Its Ogulcan, really appreciated your support! Like you suggested I tried everything and now I am opening a new issue. As a summary, I do have a usb drive with anybody setup, anaconda setup, anybody license file and model we are using. I am using same usb drive to install all of those softwares and using the same model, all other computers run the code except mine, I am getting KeyError everytime. So like you said it is not a problem caused by model differences. I

If you need I can provide anything you need to solve this issue. Thank you for your support once again! Hope to solve this problem as soon as possible.

Ogulcan Guldeniz

When the license server password is wrong AnyBody fails with returncode 234,

AnyPyTools should report a more explanatory message.

ERROR: AnyPyTools : anybodycon.exe exited unexpectedly. Return code: 234

Your first link on landing page (the AMS) is broken.

Setting value of Data of an AnyFunInterpol through SetValue, does not work as expected.
I have this AnyScript:

  T = {0, 0.016, 0.024, 1};
  Data = DesignVar({{<DATA>}});
  Type = PiecewiseLinear;
};

and this Python-code:

values = ["{{0,0,0,0}}", "{{0.01, 0.01, 0, 0}}", "{{0.02, 0.02, 0, 0}}"];
macro = [
    Load('main.any'),
    SetValue('Main.Model.ErrorFun.Data', values),
    OperationRun('Main.RunApplication'),
    Dump('Main.Study.Output.Model.Dist.Pos'),
    Dump('Main.Model.ErrorFun.Data')
]
macro_list = AnyMacro(macro, number_of_macros=len(values))

filevalues_macro = [
    Load('main.any'),
    OperationRun('Main.RunApplication'),
    Dump('Main.Study.Output.Model.Dist.Pos'),
    Dump('Main.Model.ErrorFun.Data')
]
baseline_macro = AnyMacro(baseline)

app = AnyPyProcess(num_process = 4)
results = app.start_macro(macro_list)
fv_results = app.start_macro(AnyMacro(filevalues_macro))

for result in results:
    plt.plot(result['Main.Study.Output.Model.Dist.Pos'], label=result['Main.Model.ErrorFun.Data'])

lbl = "File values: ["+", ".join(str(x) for x in fv_results[0]["Main.Model.ErrorFun.Data"][0])+"]"
plt.plot(fv_results[0]['Main.Study.Output.Model.Dist.Pos'], "--", label=lbl)

plt.legend()
plt.show()

Setting to 0,0,0,0 gives this plot: http://pasteall.org/pic/show.php?id=119069
Setting to 0.01, 0.01, 0, 0 gives this plot: http://pasteall.org/pic/show.php?id=119070
Setting to 0.02, 0.02, 0, 0 gives this plot: http://pasteall.org/pic/show.php?id=119071

I would have expected that the solid lines were the same on all plots.

The limits to the number of current processes in version 7.0 seems to cause a problem when the user sets number_of_process to a higher number

app = AnyPyProcess(number_of_processes = 16)

I suspect this is caused by AnyPyTools suppressing all popup windows from AnyBody which cause all process to pause.

This most likely happens because the repr skips the "task_*" variables in the data and hence doesn't properly close the printed scope

I'm running AnyPyTools as a package in an Anaconda environment. When I try to run the first commands of the AnyPyTools "getting started" jupyter notebook, I get an error that says "Could not locate AnyBody in registry". Any ideas on how to deal with that?

I tried uninstalling & re-installing AnyPyTools, with a shutdown in between, but still get the same error. Also, I can't find a separate AnyBody package.

Version info:

• conda version : 4.10.3
• conda-build version : 3.21.6
• python version : 3.8.12.final.0
• anypytools: version = 1.7.5 build=py38haa244fe_1 channel=conda-forge
• Windows 10 Version = 10.0.18363 Build = 18363

code

(from http://localhost:8888/notebooks/01_Getting_started_with_anypytools.ipynb)

from anypytools import AnyPyProcess 
    app = AnyPyProcess()

Error message:

 OSError: Could not locate AnyBody in registry

Trace:

---------------------------------------------------------------------------
FileNotFoundError                         Traceback (most recent call last)
~\Anaconda3\lib\site-packages\anypytools\tools.py in get_anybodycon_path()
    461     try:
--> 462         abpath = winreg.QueryValue(
    463             winreg.HKEY_CLASSES_ROOT, "AnyBody.AnyScript\\shell\\open\\command"

FileNotFoundError: [WinError 2] The system cannot find the file specified

During handling of the above exception, another exception occurred:

OSError                                   Traceback (most recent call last)
~\AppData\Local\Temp/ipykernel_11000/586603320.py in <module>
      1 from anypytools import AnyPyProcess
----> 2 app = AnyPyProcess()

~\Anaconda3\lib\site-packages\anypytools\abcutils.py in __init__(self, num_processes, anybodycon_path, timeout, silent, ignore_errors, warnings_to_include, fatal_warnings, return_task_info, keep_logfiles, logfile_prefix, python_env, debug_mode, use_gui, priority, **kwargs)
    537 
    538         if anybodycon_path is None:
--> 539             anybodycon_path = get_anybodycon_path()
    540         anybodycon_path = Path(anybodycon_path)
    541         if use_gui:

~\Anaconda3\lib\site-packages\anypytools\tools.py in get_anybodycon_path()
    464         )
    465     except WindowsError:
--> 466         raise WindowsError("Could not locate AnyBody in registry")
    467     abpath = abpath.rsplit(" ", 1)[0].strip('"')
    468     abpath = os.path.join(os.path.dirname(abpath), "AnyBodyCon.exe")

OSError: Could not locate AnyBody in registry

abcutils.AnyPyProcess.start_macro shoud return more informaiton when the model fails. If the failure happens right after a macro command, then also add the macro command to the error message.

Hi! Not a blocker or essential for the JOSS submission, but since this package is intended for reproducible science and you already have a set of Jupyter notebooks as a tutorial I think it would be awesome to use binder for this.

It would help folks to follow the tutorial using an interactive environment.
If you would like to discuss or need some help feel free to ping me

The way the IPython consoles identifies itself seems to have changed. Thus, AnyPyTools tries to use the javascript widget to draw the progress bar, even if it should only be used for the notebook and qt-console.

We should make a better error/warning when using search_subdirs which doesn't match any files.

e.g.

app.start_marcro(..., search_subdirs="no_such_file.any") 

Right now this fails silently

Thanks, @pgalibarov for pointing this out.

fix_interpolation.zip

Patch to fix the interpolation function when writing the interpolated database.

When rewriting the interpolated time-dependent columns, it was trying to access the column which was used as interpolating value, although it had been dropped from the dataframe indexes.

Enrico & Marc

get_anybodycon_path() only checks if the path is set in the registry, but not whether the given path actually exists. This results in errors without an error message if the path is empty. It would be nice to check if the path points to an existing file and throw an exception if it doesn't.

The relevant method is here.