aszaboa / szabo2023

Reused LU factorization as a preconditioner for efficient solution of the Parabolized Stability Equations

An implementation of the incompressible 2D Parabolized Stability Equations (PSE) that demonstrates how a single LU factorization can be reused to accelerate the solution of boundary layer-type problems. The code is written in the finite element language FreeFem, which interfaces with the PETSc/SLEPc libraries. Although the code was run on a single process in the study, it also work on multiple processes, using a domain-decomposition technique.

The code can reproduce Fig.15b from the following 10.1016/j.compfluid.2023.106115. If you use this code, please consider citing the paper:

@article{Szabo2024,
title = {Reused LU factorization as a preconditioner for efficient solution of the parabolized stability equations},
journal = {Computers \& Fluids},
volume = {269},
pages = {106115},
year = {2024},
issn = {0045-7930},
doi = {https://doi.org/10.1016/j.compfluid.2023.106115},
url = {https://www.sciencedirect.com/science/article/pii/S0045793023003407},
author = {Andr{\'a}ás Szab{\'o} and Gy{\"o}rgy Pa{\'a}l}
}

Code description

Dependencies

Make sure you have access to a recent FreeFEM, compiled with the PETSc and PETSc-complex (with SLEPc) plugins. More details about the PETSc and SLEPc options used in the solvers may be found in their respective manuals.

Running the code

The simulation can be run by the commands specified in the run_PSE2D.sh file, which was run under Ubuntu 18.04LTS to obtain the results. Then, the Matlab code postprocess/run_Postprocess.m can be run to generate the figure in the paper.

Code structure

The file PSE2D.edp organizes the simulation. Most of the variable definition are located in the include/def_input.idp file, and the functions/macros performing various tasks are declared in include/macro_function.idp. Several input variables can be specified via command-line arguments; these are declared by the word getARGV in the code. E.g., the number of mesh points in the streamwise direction can be changed by specifying -Nx 80 when running the code, or the iterative solver can be chosen by setting -iterSolver 1. The single exception is the input of the finite element order: it can be specified by-DVelFE=P2, P3L and P4L for P2-P1, P3-P2 and P4-P2 Lagrangian finite elements (the latter being unstable). In general, the code contains a lot of comments to explain the functionalities. For more information regarding the functionalities, the interested reader is referred to the FreeFem documentation, this tutorial, the video tutorials available in the FreeFem Youtube channel, and the FreeFem forum.