Forecasting Lake And Reservoir Ecosystems
Directions for using FLARE
In your data_location
directory run the following five commands at the command line:
git clone -b carina-data --depth 1 https://github.com/CareyLabVT/SCCData.git carina-data
git clone -b mia-data --depth 1 https://github.com/CareyLabVT/SCCData.git mia-data
git clone -b diana-data --depth 1 https://github.com/CareyLabVT/SCCData.git diana-data
git clone -b fcre --depth 1 https://github.com/CareyLabVT/noaa_gefs_forecasts.git fcre
git clone -b manual-data --depth 1 https://github.com/CareyLabVT/SCCData.git manual-data
You will also need to download the meterology file (Met_final_2015_2019.csv
)from the Environmental Data Initiative and place it in the manual-data
directory: https://portal.edirepository.org/nis/mapbrowse?packageid=edi.389.4
-
Create a directory (
forecast_location
) where you will move simulation configuration files and where you want FLARE to save the forecast output. -
Copy the
configure_FLARE.R
fromFLARE/example_configuration_files/
to yourforecast_location
. -
Copy the relevant General Lake Model nml files
FLARE/example_configuration_files/
to yourforecast_location
-
Copy either of the two files below to from the
FLARE/example_configuration_files/
toforecast_location
-
initiate_forecast_example.R
provides an example for running FLARE once. -
automated_forecast_launch_example.R
provides an example for automated running of forecasts.
-
Modify your
initiate_forecast_example.R
orautomated_forecast_launch_example.R
andconfigure_FLARE.R
scripts to customize your simulation. -
Run
initiate_forecast_example.R
orautomated_forecast_launch_example.R