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wasade avatar wasade commented on July 20, 2024

Same with the even1/10k files. Very weird. Good catch, will issue PR tomorrow

from american-gut.

wasade avatar wasade commented on July 20, 2024

I know what happened... used excel...

from american-gut.

ElDeveloper avatar ElDeveloper commented on July 20, 2024

Just so others are aware, AG sample IDs are prone to be interpreted as integers, not only by Excel but also by Pandas, so just be careful.

from american-gut.

wasade avatar wasade commented on July 20, 2024

yes, but we have things like "BLANK123.foo.1231" included

On Mon, Mar 9, 2015 at 11:23 AM, Yoshiki Vázquez Baeza <
[email protected]> wrote:

Just so others are aware, AG sample IDs are prone to be interpreted as
integers, not only by Excel but also by Pandas, so just be careful.


Reply to this email directly or view it on GitHub
#130 (comment)
.

from american-gut.

ElDeveloper avatar ElDeveloper commented on July 20, 2024

Right, AFAIK pandas doesn't require all samples to have the same type,
it is kinda funny in that it infers the type as int even if there's a
few values that cannot be cast.

On (Mar-09-15|10:26), Daniel McDonald wrote:

yes, but we have things like "BLANK123.foo.1231" included

On Mon, Mar 9, 2015 at 11:23 AM, Yoshiki Vázquez Baeza <
[email protected]> wrote:

Just so others are aware, AG sample IDs are prone to be interpreted as
integers, not only by Excel but also by Pandas, so just be careful.


Reply to this email directly or view it on GitHub
#130 (comment)
.


Reply to this email directly or view it on GitHub:
#130 (comment)

from american-gut.

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