Name: Big Data in Biomedicine
Type: Organization
Bio: The Research Group on Big Data in Biomedicine is headed by Dr. Markus List at the Chair of Experimental Bioinformatics
Location: Freising, Germany
Blog: biomedical-big-data.de
Big Data in Biomedicine's Projects
A open source framework for research data management. DEMO at https://dockerhts.compbio.sdu.dk/OpenLabFramework/login/auth
A platelet atlas
Analysis and visualization scripts for Bongiovanni et al., 2020, "SARS-CoV-2 infection is associated with a pro-thrombotic platelet phenotype"
A web application for sample and plate management of complex high-throughput screening libraries
A small-RNA sequencing analysis pipeline
Sparse Partial correlation ON Gene Expression - an R package for fast and robust ceRNA network inference
Determination of positive microRNA regulation in cancer with SPONGE and a systems biology analysis.
Bioinformatics pipeline to identify differentially active transcription factors between conditions using expression and epigenetic data